SECOND ANNUAL
Crops in silico
SYMPOSIUM AND WORKSHOP
June 26-28th 2017
University of Oxford, UK
Select Presentations for Download
- Education and Community Building (in Astrophysics)- Gabrielle Allen, University of Illinois
- Semantic Annotation of Biosimulation Models for Model Reuse and Composition – Brian Carlson, University of Michigan
- Models for Model Integration – Daniel S. Katz, University of Illinois
- Signal Integration and the Bud Activation Switch – Ottoline Leyser, Cambridge University
- Templates, Anchors, and Matryoshkas: A Vision for Crop Systems Biology – Eberhard O. Voit, Georgia Institute of Technology
Meeting Recap
The second annual Crops in silico Symposium and Workshop was hosted at St. Catherine’s College, University of Oxford, on June 26-28, 2017. The goals of this Symposium and Workshop were:
- Briefly introduce the Crops in silico concept as an integrative and multi-scale modeling platform.
- Learn from plant and computer scientists who have progressed plant modeling or tools to enhance modeling in different domains.
- Discuss where sustainable and practical collaborations may be valuable and achievable in bridging layers of organization.
- Map the next steps for the community
57 registrants from 23 institutions and companies and six countries convened for the Symposium.
The event kicked off June 26 with Keynote Speaker Eberhard Voit, Professor and GRA Eminent Scholar and Flanagan Chair in Biological Systems at the Georgia Institute of Technology. His talk addressed the difficulties of modelling complex biological systems and how those difficulties can be overcome by dividing a complex modeling task into a coarse, framework model and more detailed, finer-grained models of subsystems.
The meeting included five presentations on recent developments in plant modelling at different levels of biological organization, three presentations on recent developments in model integration, four presentations on users and usability of models, and one presentation outlining the steps to the successful deployment of a community driven software platform to advance and support research in astrophysics.
The overall goal of the workshop was to identify ways to build the Cis community. The first part of the workshop focused on identifying ways to establish successful research collaborations. Next, attendees brainstormed ideas of how to build a Crops in silico research community. The second portion of the workshop was focused on fostering new research collaborations.
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- 2nd annual Symposium and Workshop participants.
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- Speaker discussion session
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- Workshop: Building the Crops in silico community.
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- Workshop: fostering new research collaborations
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- Workshop: fostering new research collaborations
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- Interactive poster session
Who should attend?
Join experts in experimentation, agronomy, physiology, plant development, phenotyping, as well as experts in computational modeling, software development, and data visualization.
agenda
Download the program.
Speakers
Eberhard Voit, Keynote Speaker
Professor and GRA Eminent Scholar, Flanagan Chair in Biological Systems, Georgia Institute of Technology
Gabrielle D. Allen
Professor of Astronomy and Associate Dean for Research and Research Education, University of Illinois
Malcolm Bennett
Professor of Plant Sciences, The University of Nottingham
Brian Carlson
Research Assistant Professor, Molecular & Integrative Physiology, University of Michigan
Min Chen
Professor of Scientific Visualisation, Oxford University
Daniel S. Katz
Assistant Director for Scientific Software and Applications, National Center for Supercomputing Applications & Research Associate Professor, Electrical and Computer Engineering & Computer Science, University of Illinois
Meagan Lang
Postdoctoral Research Associate in the National Center for Supercomputing Applications at the University of Illinois
Ottoline Leyser
Director of the the Sainsbury Laboratory, Cambridge University
Steve Long
Gutgsell Endowed Professor, Department of Crop Sciences and Plant Biology, University of Illinois
Newton Abraham Visiting Professor,Department of Plant Science, Oxford University
Frank Ludewig
Scientific coordinator of the Cassava Source-Sink project, Universität Erlangen-Nürnberg
Matt Reynolds
Wheat Physiologist, CGIAR and International Maize and Wheat Improvement Center
Cranos M. Williams
Director of the EnBiSys Research Laboratory and Assistant Professor of Electrical and Computer Engineering at North Carolina State University
